Subversion Repositories lagranto.wrf

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1 
#!/bin/csh
 1 
#!/bin/csh
2 
 
 2 
 
3 
# -----------------------------------------------------------------------------
 3 
# -----------------------------------------------------------------------------
4 
# Set some general parameters
 4 
# Set some general parameters
5 
# -----------------------------------------------------------------------------
 5 
# -----------------------------------------------------------------------------
6 
 
 6 
 
7 
# Usage
 7 
# Usage
8 
if ( $#argv == 0 ) then
 8 
if ( $#argv == 0 ) then
9 
  echo "install.sh [lib|core|goodies|links|all] "
 9 
  echo "install.sh [lib|core|goodies|links|all|clean] "
10 
  exit 0
 10 
  exit 0
11 
endif
 11 
endif
12 
 
 12 
 
13 
# Set the mode
 13 
# Set the mode
14 
set mode = $1
 14 
set mode = $1
15 
 
 15 
 
16 
# Set paths for development
16 
# Set paths for development
17 
set path_devel = "/home/michaesp/project/lagranto.wrf/"
 17 
set path_devel = "/home/michaesp/project/lagranto.wrf/"
18 
 
 18 
 
19 
# Init Fortran compiler and set netCDF acccordingly
 19 
# Init Fortran compiler and set netCDF acccordingly
20 
setenv FORTRAN pgf90
20 
setenv FORTRAN pgf90
21 
 
 21 
 
22 
# Init netCDF library depending on the Fortran compiler
 22 
# Init netCDF library depending on the Fortran compiler
23 
if ( "${FORTRAN}" == "pgf90" ) then
 23 
if ( "${FORTRAN}" == "pgf90" ) then
24 
  module load pgi/9.0-1
 24 
  module load pgi/9.0-1
25 
  module load netcdf/4.1.1-pgf90
 25 
  module load netcdf/4.1.1-pgf90
26 
 
 26 
 
27 
else if ( "${FORTRAN}" == "gfortran" ) then
 27 
else if ( "${FORTRAN}" == "gfortran" ) then
28 
  module load gfortran
 28 
  module load gfortran
29 
  module load netcdf/4.1.1
 29 
  module load netcdf/4.1.1
30 
 
 30 
 
31 
else if ( "${FORTRAN}" == "ifort" ) then
 31 
else if ( "${FORTRAN}" == "ifort" ) then
32 
  module load ifort/10.1.017
 32 
  module load ifort/10.1.017
33 
  module load netcdf/4.1.1-ifort
 33 
  module load netcdf/4.1.1-ifort
34 
 
 34 
 
35 
else
 35 
else
36 
  echo "Fortran Compiler ${FORTRAN} not supported... Exit"
 36 
  echo "Fortran Compiler ${FORTRAN} not supported... Exit"
37 
  exit 1
 37 
  exit 1
38 
 
 38 
 
39 
endif
 39 
endif
40 
 
 40 
 
41 
# -----------------------------------------------------------------------------
 41 
# -----------------------------------------------------------------------------
42 
# Set internal parameters and detailed installation mode
 42 
# Set internal parameters and detailed installation mode
43 
# -----------------------------------------------------------------------------
 43 
# -----------------------------------------------------------------------------
44 
 
 44 
 
45 
# Set LAGRANTO environment variable
 45 
# Set LAGRANTO environment variable
46 
setenv LAGRANTO ${path_devel}
 46 
setenv LAGRANTO ${path_devel}
47 
 
 47 
 
48 
# Set netCDF paths
 48 
# Set netCDF paths
49 
setenv NETCDF_LIB ${NETCDF}/lib/
49 
setenv NETCDF_LIB ${NETCDF}/lib/
50 
setenv NETCDF_INC ${NETCDF}/include/
 50 
setenv NETCDF_INC ${NETCDF}/include/
51 
 
 51 
 
52 
# Set list of core programs
 52 
# Set list of core programs
53 
set core  = "caltra trace select"
 53 
set core  = "caltra trace select"
54 
 
 54 
 
55 
# Set list of goodies
 55 
# Set list of goodies
56 
set tools = "extract gettidiff getvars list2lsl lsl2list mergetra newtime reformat timeres trainfo difference datelist tracal wrfmap"
56 
set tools = "extract gettidiff getvars list2lsl lsl2list mergetra newtime reformat timeres trainfo difference datelist tracal wrfmap"
57 
 
 57 
 
58 
# Set list of libraries
 58 
# Set list of libraries
59 
set libs  = "iotra inter times libcdfio libcdfplus libwrf"
 59 
set libs  = "iotra inter times libcdfio libcdfplus libwrf"
60 
 
 60 
 
61 
# Core programs
 61 
# Core programs
62 
foreach prog ( $core )
 62 
foreach prog ( $core )
63 
   if ( "${prog}" == "${mode}" ) then
 63 
   if ( "${prog}" == "${mode}" ) then
64 
      set core  = ${prog}
 64 
      set core  = ${prog}
65 
      set mode  = "core"
 65 
      set mode  = "core"
66 
   endif
 66 
   endif
67 
end
 67 
end
68 
 
 68 
 
69 
# Goodies
 69 
# Goodies
70 
foreach tool ( $tools )
 70 
foreach tool ( $tools )
71 
   if ( "${tool}" == "${mode}" ) then
 71 
   if ( "${tool}" == "${mode}" ) then
72 
      set tools = ${tool}
 72 
      set tools = ${tool}
73 
      set mode  = "goodies"
 73 
      set mode  = "goodies"
74 
   endif
 74 
   endif
75 
end
 75 
end
76 
 
 76 
 
77 
# Libraries
 77 
# Libraries
78 
foreach lib ( $libs )
 78 
foreach lib ( $libs )
79 
   if ( "${lib}" == "${mode}" ) then
 79 
   if ( "${lib}" == "${mode}" ) then
80 
      set libs  = ${lib}
 80 
      set libs  = ${lib}
81 
      set mode  = "lib"
 81 
      set mode  = "lib"
82 
   endif
 82 
   endif
83 
end
 83 
end
84 
 
 84 
 
- 
 
 85 
# -----------------------------------------------------------------------------
- 
 
 86 
# Make clean
- 
 
 87 
# -----------------------------------------------------------------------------
- 
 
 88 
 
- 
 
 89 
if ( "${mode}" == "clean" ) then
- 
 
 90 
 
- 
 
 91 
\rm -f caltra/caltra caltra/caltra.o
- 
 
 92 
\rm -f select/select select/select.o select/special.o
- 
 
 93 
\rm -f trace/trace   trace/trace.o
- 
 
 94 
 
- 
 
 95 
foreach tool ( $tools )
- 
 
 96 
  \rm -f goodies/${tool} goodies/${tool}.o
- 
 
 97 
end
- 
 
 98 
\rm -f goodies/*.mod
- 
 
 99 
 
- 
 
 100 
\rm lib/*.a lib/*.o
- 
 
 101 
 
- 
 
 102 
\rm -f bin/caltra bin/caltra.sh
- 
 
 103 
\rm -f bin/select bin/select.sh bin/seltra bin/seltra.sh
- 
 
 104 
\rm -f bin/trace  bin/trace.sh
- 
 
 105 
foreach tool ( $tools )
- 
 
 106 
  \rm -f bin/${tool} bin/${tool}.sh
- 
 
 107 
end
- 
 
 108 
\rm -f bin/lagrantohelp.sh
- 
 
 109 
 
- 
 
 110 
exit 0
- 
 
 111
- 
 
 112 
endif
85 
 
 113 
 
86 
# -----------------------------------------------------------------------------
 114 
# -----------------------------------------------------------------------------
87 
# Install libraries
115 
# Install libraries
88 
# -----------------------------------------------------------------------------
 116 
# -----------------------------------------------------------------------------
89 
 
 117 
 
90 
if ( ("${mode}" == "lib") | ("${mode}" == "all" ) ) then
 118 
if ( ("${mode}" == "lib") | ("${mode}" == "all" ) ) then
91 
 
 119 
 
92 
echo "-----------------------------------------------------------------"
 120 
echo "-----------------------------------------------------------------"
93 
echo "Installing libraries"
 121 
echo "Installing libraries"
94 
echo "-----------------------------------------------------------------"
 122 
echo "-----------------------------------------------------------------"
95 
echo
 123 
echo
96 
 
 124 
 
97 
# Change to library directory
 125 
# Change to library directory
98 
cd ${LAGRANTO}/lib
 126 
cd ${LAGRANTO}/lib
99 
 
 127 
 
100 
# Loop over all libraries - compile and make library
 128 
# Loop over all libraries - compile and make library
101 
foreach lib ( $libs )
 129 
foreach lib ( $libs )
102 
 
 130 
 
103 
\rm -f ${lib}.a
 131 
\rm -f ${lib}.a
104 
\rm -f ${lib}.o
 132 
\rm -f ${lib}.o
105 
echo ${FORTRAN} -c -O ${lib}.f
 133 
echo ${FORTRAN} -c -O ${lib}.f
106 
${FORTRAN} -c -O -I ${NETCDF_INC} ${lib}.f
 134 
${FORTRAN} -c -O -I ${NETCDF_INC} ${lib}.f
107 
ar r ${lib}.a ${lib}.o
 135 
ar r ${lib}.a ${lib}.o
108 
\rm -f ${lib}.l ${lib}.o
 136 
\rm -f ${lib}.l ${lib}.o
109 
ranlib ${lib}.a
 137 
ranlib ${lib}.a
110 
if ( ! -f ${lib}.a ) then
 138 
if ( ! -f ${lib}.a ) then
111 
  echo "Problem in compiling ${lib} ... Stop"
 139 
  echo "Problem in compiling ${lib} ... Stop"
112 
  exit 1
 140 
  exit 1
113 
endif
 141 
endif
114 
 
 142 
 
115 
end
 143 
end
116 
 
 144 
 
117 
endif
 145 
endif
118 
 
 146 
 
119 
 
 147 
 
120 
# -----------------------------------------------------------------------------
 148 
# -----------------------------------------------------------------------------
121 
# Check that libraries are ok
 149 
# Check that libraries are ok
122 
# -----------------------------------------------------------------------------
 150 
# -----------------------------------------------------------------------------
123 
 
 151 
 
124 
echo
 152 
echo
125 
echo "-----------------------------------------------------------------"
 153 
echo "-----------------------------------------------------------------"
126 
echo "Check that all libraries are available"
 154 
echo "Check that all libraries are available"
127 
echo "-----------------------------------------------------------------"
 155 
echo "-----------------------------------------------------------------"
128 
echo
 156 
echo
129 
 
 157 
 
130 
# Change to library directory
 158 
# Change to library directory
131 
cd ${LAGRANTO}/lib
 159 
cd ${LAGRANTO}/lib
132 
 
 160 
 
133 
# Check whether all libraries are available
 161 
# Check whether all libraries are available
134 
foreach lib ( $libs )
 162 
foreach lib ( $libs )
135 
 
 163 
 
136 
if ( ! -f ${lib}.a ) then
 164 
if ( ! -f ${lib}.a ) then
137 
  echo "Library ${lib} missing... Stop"
 165 
  echo "Library ${lib} missing... Stop"
138 
  exit 1
 166 
  exit 1
139 
else
 167 
else
140 
  ls -l ${lib}.a
168 
  ls -l ${lib}.a
141 
endif
 169 
endif
142 
 
 170 
 
143 
end
 171 
end
144 
 
 172 
 
145 
# Exit if only libraries shoudl be installed
 173 
# Exit if only libraries shoudl be installed
146 
if ( "${mode}" == "lib" ) exit 0
 174 
if ( "${mode}" == "lib" ) exit 0
147 
 
 175 
 
148 
# -----------------------------------------------------------------------------
 176 
# -----------------------------------------------------------------------------
149 
# Compile Lagrango core programs
 177 
# Compile Lagrango core programs
150 
# -----------------------------------------------------------------------------
 178 
# -----------------------------------------------------------------------------
151 
 
 179 
 
152 
if ( ("${mode}" == "all" ) | ("${mode}" == "core" ) ) then
 180 
if ( ("${mode}" == "all" ) | ("${mode}" == "core" ) ) then
153 
 
 181 
 
154 
echo
 182 
echo
155 
echo "-----------------------------------------------------------------"
 183 
echo "-----------------------------------------------------------------"
156 
echo "Installing Lagranto core programs"
 184 
echo "Installing Lagranto core programs"
157 
echo "-----------------------------------------------------------------"
 185 
echo "-----------------------------------------------------------------"
158 
 
 186 
 
159 
foreach prog ( $core )
 187 
foreach prog ( $core )
160 
 
 188 
 
161 
echo
 189 
echo
162 
echo "----- $prog"
 190 
echo "----- $prog"
163 
echo
 191 
echo
164 
cd ${LAGRANTO}/${prog}
 192 
cd ${LAGRANTO}/${prog}
165 
\rm -f ${prog}.o
193 
\rm -f ${prog}.o
166 
\rm -f ${prog}
 194 
\rm -f ${prog}
167 
if ( "${prog}" == "select" ) \rm special.o
 195 
if ( "${prog}" == "select" ) \rm special.o
168 
\rm -f ${prog}
 196 
\rm -f ${prog}
169 
make -f ${prog}.make
 197 
make -f ${prog}.make
170 
if ( ! -f ${prog} ) then
 198 
if ( ! -f ${prog} ) then
171 
  echo "Problem in compiling ${prog} ... Stop"
 199 
  echo "Problem in compiling ${prog} ... Stop"
172 
  exit 1
 200 
  exit 1
173 
endif
 201 
endif
174 
 
 202 
 
175 
end
 203 
end
176 
 
 204 
 
177 
endif
 205 
endif
178 
 
 206 
 
179 
# -----------------------------------------------------------------------------
 207 
# -----------------------------------------------------------------------------
180 
# Check that all Lagranto core programs are available
 208 
# Check that all Lagranto core programs are available
181 
# -----------------------------------------------------------------------------
 209 
# -----------------------------------------------------------------------------
182 
 
 210 
 
183 
echo
 211 
echo
184 
echo "-----------------------------------------------------------------"
 212 
echo "-----------------------------------------------------------------"
185 
echo "Check that all Lagranto core programs are available"
 213 
echo "Check that all Lagranto core programs are available"
186 
echo "-----------------------------------------------------------------"
 214 
echo "-----------------------------------------------------------------"
187 
echo
 215 
echo
188 
 
 216 
 
189 
foreach prog ( $core )
 217 
foreach prog ( $core )
190 
 
 218 
 
191 
  cd ${LAGRANTO}/${prog}
 219 
  cd ${LAGRANTO}/${prog}
192 
  if ( ! -f ${prog} ) then
 220 
  if ( ! -f ${prog} ) then
193 
    echo "${prog} is missing... Stop"
 221 
    echo "${prog} is missing... Stop"
194 
    exit 1
 222 
    exit 1
195 
  else
 223 
  else
196 
    ls -l ${prog}
224 
    ls -l ${prog}
197 
  endif
 225 
  endif
198 
 
 226 
 
199 
end
 227 
end
200 
 
 228 
 
201 
# Exit if only core programs shoudl be installed
 229 
# Exit if only core programs shoudl be installed
202 
if ( "${mode}" == "core" ) exit 0
 230 
if ( "${mode}" == "core" ) exit 0
203 
 
 231 
 
204 
# -----------------------------------------------------------------------------
 232 
# -----------------------------------------------------------------------------
205 
# Compile Lagrango goodies
 233 
# Compile Lagrango goodies
206 
# -----------------------------------------------------------------------------
 234 
# -----------------------------------------------------------------------------
207 
 
 235 
 
208 
if ( ("${mode}" == "all" ) | ("${mode}" == "goodies" ) ) then
 236 
if ( ("${mode}" == "all" ) | ("${mode}" == "goodies" ) ) then
209 
 
 237 
 
210 
echo
 238 
echo
211 
echo "-----------------------------------------------------------------"
 239 
echo "-----------------------------------------------------------------"
212 
echo "Installing Lagranto goodies"
 240 
echo "Installing Lagranto goodies"
213 
echo "-----------------------------------------------------------------"
 241 
echo "-----------------------------------------------------------------"
214 
 
 242 
 
215 
cd ${LAGRANTO}/goodies
 243 
cd ${LAGRANTO}/goodies
216 
 
 244 
 
217 
foreach tool ( $tools )
 245 
foreach tool ( $tools )
218 
 
 246 
 
219 
echo
 247 
echo
220 
echo "----- ${tool}"
 248 
echo "----- ${tool}"
221 
echo
 249 
echo
222 
\rm -f ${tool}.o
 250 
\rm -f ${tool}.o
223 
\rm -f ${tool}
 251 
\rm -f ${tool}
224 
if ( -f ${tool}.make ) then
 252 
if ( -f ${tool}.make ) then
225 
   make -f ${tool}.make
 253 
   make -f ${tool}.make
226 
else if ( -f ${tool}.install ) then
 254 
else if ( -f ${tool}.install ) then
227 
   ./${tool}.install
 255 
   ./${tool}.install
228 
endif
 256 
endif
229 
 
 257 
 
230 
if ( ! -f ${tool} ) then
 258 
if ( ! -f ${tool} ) then
231 
  echo "Problem in compiling ${tool} ... Stop"
 259 
  echo "Problem in compiling ${tool} ... Stop"
232 
  exit 1
 260 
  exit 1
233 
endif
 261 
endif
234 
 
 262 
 
235 
end
 263 
end
236 
 
 264 
 
237 
endif
 265 
endif
238 
 
 266 
 
239 
# -----------------------------------------------------------------------------
 267 
# -----------------------------------------------------------------------------
240 
# Check that all Lagranto goodies are available
 268 
# Check that all Lagranto goodies are available
241 
# -----------------------------------------------------------------------------
 269 
# -----------------------------------------------------------------------------
242 
 
 270 
 
243 
echo
 271 
echo
244 
echo "-----------------------------------------------------------------"
 272 
echo "-----------------------------------------------------------------"
245 
echo "Check that all Lagranto goodies are available"
 273 
echo "Check that all Lagranto goodies are available"
246 
echo "-----------------------------------------------------------------"
 274 
echo "-----------------------------------------------------------------"
247 
echo
 275 
echo
248 
 
 276 
 
249 
cd ${LAGRANTO}/goodies
 277 
cd ${LAGRANTO}/goodies
250 
 
 278 
 
251 
foreach tool ( $tools )
 279 
foreach tool ( $tools )
252 
 
 280 
 
253 
if ( ! -f ${tool} ) then
 281 
if ( ! -f ${tool} ) then
254 
  echo "${tool} is missing... Stop"
 282 
  echo "${tool} is missing... Stop"
255 
  exit 1
 283 
  exit 1
256 
else
 284 
else
257 
  ls -l ${tool}
285 
  ls -l ${tool}
258 
endif
 286 
endif
259 
 
 287 
 
260 
end
 288 
end
261 
 
 289 
 
262 
endif
 290 
endif
263 
 
 291 
 
264 
# Exit if only goodies should be installed
 292 
# Exit if only goodies should be installed
265 
if ( "${mode}" == "goodies" ) exit 0
 293 
if ( "${mode}" == "goodies" ) exit 0
266 
 
 294 
 
267 
# -----------------------------------------------------------------------------
 295 
# -----------------------------------------------------------------------------
268 
# Create links to programs
 296 
# Create links to programs
269 
# -----------------------------------------------------------------------------
 297 
# -----------------------------------------------------------------------------
270 
 
 298 
 
271 
if ( ("${mode}" == "all" ) | ("${mode}" == "links" )  ) then
 299 
if ( ("${mode}" == "all" ) | ("${mode}" == "links" )  ) then
272 
 
 300 
 
273 
echo
 301 
echo
274 
echo "-----------------------------------------------------------------"
 302 
echo "-----------------------------------------------------------------"
275 
echo "Create links in ${LAGRANTO}/bin/"
 303 
echo "Create links in ${LAGRANTO}/bin/"
276 
echo "-----------------------------------------------------------------"
 304 
echo "-----------------------------------------------------------------"
277 
echo
 305 
echo
278 
 
 306 
 
279 
if ( ! -d ${LAGRANTO}/bin ) mkdir ${LAGRANTO}/bin
 307 
if ( ! -d ${LAGRANTO}/bin ) mkdir ${LAGRANTO}/bin
280 
cd ${LAGRANTO}/bin
 308 
cd ${LAGRANTO}/bin
281 
 
 309 
 
282 
ln -svf ${LAGRANTO}/bin/lagrantohelp        lagrantohelp.sh
 310 
ln -svf ${LAGRANTO}/bin/lagrantohelp        lagrantohelp.sh
283 
 
 311 
 
284 
ln -svf ${LAGRANTO}/caltra/caltra.sh        caltra.sh
 312 
ln -svf ${LAGRANTO}/caltra/caltra.sh        caltra.sh
285 
ln -svf ${LAGRANTO}/select/select.sh        select.sh
 313 
ln -svf ${LAGRANTO}/select/select.sh        select.sh
286 
ln -svf ${LAGRANTO}/trace/trace.sh          trace.sh
 314 
ln -svf ${LAGRANTO}/trace/trace.sh          trace.sh
287 
 
 315 
 
288 
ln -svf ${LAGRANTO}/caltra/caltra.sh        caltra
 316 
ln -svf ${LAGRANTO}/caltra/caltra.sh        caltra
289 
ln -svf ${LAGRANTO}/select/select.sh        select
 317 
ln -svf ${LAGRANTO}/select/select.sh        select
290 
ln -svf ${LAGRANTO}/trace/trace.sh          trace
 318 
ln -svf ${LAGRANTO}/trace/trace.sh          trace
291 
 
 319 
 
292 
foreach tool ( $tools )
 320 
foreach tool ( $tools )
293 
 
 321 
 
294 
ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}.sh
322 
ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}.sh
295 
ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}
323 
ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}
296 
 
 324 
 
297 
end
 325 
end
298 
 
 326 
 
299 
# Set extra name for <select> to avoid conflict in BASH
 327 
# Set extra name for <select> to avoid conflict in BASH
300 
ln -svf ${LAGRANTO}/select/select.sh        seltra
 328 
ln -svf ${LAGRANTO}/select/select.sh        seltra
301 
ln -svf ${LAGRANTO}/select/select.sh        seltra.sh
 329 
ln -svf ${LAGRANTO}/select/select.sh        seltra.sh
302 
 
 330 
 
303 
endif
 331 
endif
304 
 
 332 
 
305 
# -----------------------------------------------------------------------------
 333 
# -----------------------------------------------------------------------------
306 
# Final tasks
 334 
# Final tasks
307 
# -----------------------------------------------------------------------------
 335 
# -----------------------------------------------------------------------------
308 
 
 336 
 
309 
echo
 337 
echo
310 
echo "-----------------------------------------------------------------"
 338 
echo "-----------------------------------------------------------------"
311 
echo "Installation complete"
 339 
echo "Installation complete"
312 
echo "-----------------------------------------------------------------"
 340 
echo "-----------------------------------------------------------------"
313 
echo
 341 
echo
314 
echo "Please set the environmental variable LAGRANTO"
 342 
echo "Please set the environmental variable LAGRANTO"
315 
echo
 343 
echo
316 
echo "    setenv LAGRANTO ${LAGRANTO}"
 344 
echo "    setenv LAGRANTO ${LAGRANTO}"
317 
echo
 345 
echo
318
346
319 
 
 347 
 
320 
 
 348 
 
321 
 
 349 
 
322 
 
 350