Subversion Repositories lagranto.um

#!/bin/csh

# ---------------------------------------------------------------------

# Usage

# ---------------------------------------------------------------------

# Set Lagranto 

set LAGRANTO = ${LAGRANTOBASE}.${MODEL}/

# Write usage information

if ( (${#argv} == 0) ) then

  echo 

  echo "-----------------------------------------------------------------------------------"

  echo "Usage: "

  echo 

  echo "  1. lagranto {caseid[.label]} startdate enddate {startf} {select} [flags] "

  echo

  echo "         caseid     : case     (name of case directories; label appears in output directoy)"

  echo "                      local    (everything is run in local directory)"

  echo "                      interim  (take wind fields from Era-Interim)"

  echo "                      analysis (take wind fields from ECMWF operational analysis)"

  echo "                      forecast (take wind fields from ECMWF operational forecast)" 

  echo

  echo "         startdate  : start date in format yyyymmdd_hh(mm)"

  echo 

  echo "         enddate    : end date in format yyyymmdd_hh(mm)"

  echo  

  echo "         startf     : [ file | criterion ] with starting coordinates (lon,lat,p)"

  echo

  echo "         select     : [ file | criterion ] for trajectory selection (set 'nil' for none)"

  echo

  echo "         flags      : -o     outfile   (name of output trajectory file) "

  echo "                      -j               (jumping flag for crossing lower boundary)"

  echo "                      -v     filename  (name of tracing file)"

  echo "                      -r     filename  (name of region file)"

  echo "                      -noclean         (do not clean trajectory directory after run)"

  echo "                      -prep            (prepare run script, but do not run lagranto)"

  echo "                      -log             (logfile is written to screen instead of logfile)"

  echo "                      -changet         (change times on netCDF files realtive to startdate)"

  echo

  echo "  2. lagranto [ -open | -remove ] caseid[.label] "

  echo

  echo "        -open   : change to the run directory [open a new Xterm window]"

  echo "        -remove : remove the whole run directory"

  echo

  echo "Examples:"

  echo 

  echo "-----------------------------------------------------------------------------------"

  exit 0

endif

# Check whether LAGRANTO was set with setenv

set test = `setenv | grep LAGRANTO` 

if ( "${test}" == "" ) then

   echo "---------------------------------------------------------------------"

   echo "Please set environmental variable <LAGRANTO> to your source directory"

   echo 'csh > setenv LAGRANTO ${TO_YOUR_LAGRANTO_INSTALLATION}'

   echo "---------------------------------------------------------------------"

   exit 1

endif

# ---------------------------------------------------------------------

# Set some general parameters

# ---------------------------------------------------------------------

# Set the prefix of the primary and secondary data files

set charp = 'P'

set chars = 'S'

# Set the name of the run script

set runscript = "runscript"

# Remember the calling directory

set calldir = $PWD

# ---------------------------------------------------------------------

# Parameter handling

# ---------------------------------------------------------------------

# Write title

echo

echo '========================================================='

echo '             *** START OF LAGRANTO ***             '

echo

# Save the complete argument list

set lagranto_call = "$*"

echo '---- HANDLE ARGUMENTS -----------------------------------'

echo

# Get fixed arguments

if (${#argv} == 1) then

  set mode = '-open'

  set caseid    = "$1"

  shift

else if (${#argv} == 2) then

  set mode      = "$1"

  set caseid    = "$2"

  shift

  shift

else

  set caseid    = "$1"

  set startdate = "$2"

  set enddate   = "$3"

  set startf    = "$4"

  set select    = "$5"

  set mode      = "runlagranto"

  shift

  shift

  shift

  shift

  shift

endif

# Split <caseid> into base and appendix 

set casebase = `(echo $caseid | awk -F "." '{print $1}')`   

set appendix = `(echo $caseid | awk -F "." '{print $2}')`   

if ( "${appendix}" != "" ) then

  set appendix = ".${appendix}"

endif

# Set the directories (depending on <caseid>)

if ( "${casebase}" == "local" ) then

  set cdfdir = $PWD

  set tradir = $PWD

else if ( "${casebase}" == "interim" ) then

  set cdfdir = /net/dansgaard/atmosdyn/erainterim/cdf/

  set tradir = $PWD

else if ( "${casebase}" == "analysis" ) then

  set cdfdir = 'TO_BE_SPECIFIED'

  set tradir = $PWD

  echo "ERROR: caseid (analysis) not yet implemented"

  exit 1  

else if ( "${casebase}" == "forecast" ) then

  set cdfdir = 'TO_BE_SPECIFIED'

  set tradir = $PWD

  echo "ERROR: caseid (forecast) not yet implemented"

  exit 1  

else

  set cdfdir = ${HOME}/cdf/${casebase}

  set tradir = ${HOME}/tra/${casebase}

endif

# Change to the run directory if requested

if ( "${mode}" == "-open" ) then

   set count = 0   

   foreach folder ( ${tradir}/ntr_*_${caseid}_* )

     @ count = ${count} + 1

     echo "[${count}] ${folder}"

   end

   echo

   echo "Please select directory [0...${count}]"

   set id = $<

   set count = 0   

   foreach folder ( ${tradir}/ntr_*_${caseid}_* )

     @ count = ${count} + 1

     if ( "${count}" == "${id}" ) then 

        cd ${folder}

        xterm &

     endif

   end

   exit 0

endif

# Remove the whole run directory if requested

if ( "${mode}" == "-remove" ) then

   set count = 0   

   foreach folder ( ${tradir}/ntr_*_${caseid}_* )

     @ count = ${count} + 1

     echo "[${count}] ${folder}"

   end

   echo

   echo "Please select directory [0...${count}, all]"

   set id = $<

   set count = 0   

   foreach folder ( ${tradir}/ntr_*_${caseid}_* )

     @ count = ${count} + 1

     if ( ( "${count}" == "${id}" ) | ( "${id}" == "all" ) ) then 

        \rm -r ${folder}

     endif

   end

   exit 0

endif

# Show the trajectory file

if ( "${mode}" == "-show" ) then

   set count = 0   

   foreach folder ( ${tradir}/ntr_*_${caseid}_* )

     @ count = ${count} + 1

     echo "[${count}] ${folder}"

   end

   echo

   echo "Please select directory [0...${count}]"

   set id = $<

   set count = 0   

   foreach folder ( ${tradir}/ntr_*_${caseid}_* )

     @ count = ${count} + 1

     if ( "${count}" == "${id}" ) then 

        cd ${folder}

        set filename = ` sed -ne '9,9p' runscript.sh | cut -c 2-` 

	${LAGRANTO}/goodies/trainfo.sh ${filename} list | less

     endif

   end

   exit 0

endif

# Decide whether <select> is a file or an explicit criterion

set flag_select = 'file'

set test = `echo ${select} | grep ':' | wc -c`

if ( "${test}" != "0" ) then 

  set flag_select = 'criterion'

endif

# Decide whether <startf> is a file or an explicit criterion

set flag_startf = 'file'

set test = `echo ${startf} | grep ' ' | wc -c`

if ( "${test}" != "0" ) then 

  set flag_startf = 'point'

endif

set test = `echo ${startf} | grep '@' | wc -c`

if ( "${test}" != "0" ) then 

  set flag_startf = 'criterion'

endif

# Write some status information

echo " Case ID       : ${caseid}"

echo " Start date    : ${startdate}"

echo " End date      : ${enddate}"

if ( "${flag_startf}" == "criterion" ) then

    echo " Start file    : ${startf} [criterion] -> startf.criterion [file]"

else if ( "${flag_startf}" == "file" ) then

    echo " Start points  : ${startf} [file]"

else if ( "${flag_startf}" == "point" ) then

    echo " Start points  : ${startf} [point] -> startf [file]"

endif

if ( "${flag_select}" == "criterion" ) then

    echo " Selection     : ${select} [criterion] -> selectf.criterion [file]"

else

    echo " Selection     : ${select} [file]"

endif    

echo

# Set defaults for flags

set jumpflag   = ""

set tracefile  = "tracevars"

set outfile    = "lsl_${startdate}"

set keepflag   = ""

set prepflag   = ""

set logfile    = "${runscript}.logfile"

set regionf    = "regionf"

set changet    = "false"

# Handle flags

while ( $#argv > 0 )

  switch ( $argv[1] )

  echo $argv[1]

   case -j

     set jumpflag = "-j"

     echo " Flag '-j [jump]'             -> True "

     echo

   breaksw

   case -prep

     set prepflag = "prep"

     echo " Flag '-prep [prepare only]'  -> ${prepflag} "

     echo

   breaksw

   case -noclean

    set keepflag = "keep"

     echo " Flag '-noclean [no cleaning]' -> ${keepflag} "

     echo

   breaksw

   case -o

     set outfile =  $argv[2]

     echo " Flag '-o [output]'            -> ${outfile} "

     echo

   breaksw

   case -v

     set tracefile = $argv[2]

     echo " Flag '-v [tracevars]'         -> ${tracefile} "

     echo

     shift

   breaksw

   case -r

     set regionfile = $argv[2]

     echo " Flag '-r [regionfile]'        -> ${regionfile} "

     echo

     shift

   breaksw

   case -log

     set logfile = "/dev/stdout"

     echo " Flag '-v [log]'               -> ${logfile} "

   breaksw

   case -changet

     set changet = "true"

     echo " Flag '-changet [change times]'-> True "

     echo

   breaksw

  endsw

  shift;

end

# Decide whether a tracevars file is given or not

if ( -f ${tradir}/${tracefile} ) then

   set flag_tracevars = 'file'

else

   set flag_tracevars = 'nil'

endif

echo

if ( "${flag_tracevars}" == "file" ) then

    echo " Trace Vars    : ${tracefile} [file]"

else

    echo " Trace Vars    : [no fields are traced]"

endif    

echo

# Set the name of the run directory (forward/backward distinction)

set dir   = 'f'

set range = `${LAGRANTO}/bin/gettidiff.sh ${enddate} ${startdate}`

if ( ${range} < 0 ) then

  set dir   = 'b'

  set range = `${LAGRANTO}/bin/gettidiff.sh ${startdate} ${enddate}`

endif

set rundir = ${tradir}/ntr_${startdate}_${dir}${range}_${caseid}

if ( "${flag_startf}" == "criterion" ) then

  set rundir = "${rundir}_startf"

else if ( "${flag_startf}" == "point" ) then

  set rundir = "${rundir}_startf"

else if ( "${flag_startf}" == "file" ) then

  set rundir = "${rundir}_${startf}"

endif

if (  "${flag_select}" != "file" ) then

  set rundir = "${rundir}_selectf"

else

 set rundir = "${rundir}_${select}"

endif

# Write directory names

echo '---- DIRECTORIES ----------------------------------------'

echo

echo " CDF = ${cdfdir}"

echo " TRA = ${tradir}"

echo " RUN = ${rundir}"

# Check whether CDF and TRA directories exist

if ( ! -d ${cdfdir} ) then

    echo 'Cannot find CDF directory ... Stop'

    exit 1

endif

if ( ! -d ${tradir} ) then

    echo 'Cannot find TRA directory ... Stop'

    exit 1

endif

# Create the run directory

if ( ! -d ${rundir} ) then

   mkdir ${rundir}

endif 

if ( ! -d ${rundir} ) then

    echo 'Cannot create RUN directory ... Stop'

    exit 1

endif 

# ---------------------------------------------------------------------

# Handle the time specifier - startdate, enddate

# ---------------------------------------------------------------------

echo

echo '---- TIME RANGE -----------------------------------------'

echo

# Check format of start and end date - must be the same

set ns=`echo $startdate | sed -e 's/_[0-9]*//' | wc -c`

set ne=`echo $enddate   | sed -e 's/_[0-9]*//' | wc -c`

if ( $ns != $ne ) then

  echo " ERROR: start and end date must be in the same format ***"

  exit 1

endif

if ( $ns != 9 ) then

  echo " ERROR: Date format must be yyyymmdd ***"

  exit 1

endif

set ns=`echo $startdate | sed -e 's/[0-9]*_//' | wc -c`

set ne=`echo $enddate   | sed -e 's/[0-9]*_//' | wc -c`

if ( $ns != $ne ) then

  echo " ERROR: start and end date must be in the same format ***"

  exit 1

endif

if ( ( $ns != 5 ) & ( $ns != 3 ) ) then

  echo " ERROR: Time format must be hh(mm) ***"

  exit 1

endif

# Split the start and end date into <yymmdd_hh and mm>

set startdate_ymdh = `echo $startdate | cut -c 1-11`

set startdate_min  = `echo $startdate | cut -c 12-13`

if ( $startdate_min == "" ) set startdate_min = 00

set enddate_ymdh = `echo $enddate | cut -c 1-11`

set enddate_min  = `echo $enddate | cut -c 12-13`

if ( $enddate_min == "" ) set enddate_min = 00

# Get the time difference between <start_ymdh> and <end_ymdh> date

# Decide whether trajectoriesare forward or backward

set timediff_hh = `${LAGRANTO}/goodies/gettidiff ${enddate_ymdh} ${startdate_ymdh}`

if ( $timediff_hh == 0 ) then

  if ( $enddate_min > $startdate_min ) then

    set direction = f

    set idir      = 1

  else

    set direction = b

    set idir      = -1

  endif

else if ( $timediff_hh > 0 ) then

  set direction = f

  set idir      = 1

else

  set direction = b

  set idir      = -1

  @ timediff_hh = $idir * $timediff_hh

endif

# Get also minutes for time difference, if <start_min> or <end_min> != 0

set timediff_mm=

if ( $startdate_min != 00 || $enddate_min != 00 ) then

  @ min = ( $enddate_min - $startdate_min )

  if ( $min == 0 ) then

    set timediff_mm=

  else if ( $min > 0 ) then

    if ( $idir == 1 ) then

      set timediff_mm=$min

    else

      @ timediff_hh --

      @ timediff_mm = 60 - $min

    endif

  else

    if ( $idir == 1 ) then

      @ timediff_hh --

      @ timediff_mm = 60 + $min

    else

      @ timediff_mm = 0 - $min

    endif

  endif

endif

# Set the reference date equal to the startdate

set refdate=${startdate}

# Write status information

echo "Time range      : ${startdate} -> ${enddate}"

if ( ${timediff_mm} !=  "" ) then

   echo "Time difference : ${timediff_hh} h ${timediff_mm} min"

else

   echo "Time difference : ${timediff_hh} h"

endif

echo "Direction       : ${direction} (${idir})"

echo "Reference date  : ${refdate}"

# ---------------------------------------------------------------------

# Decide which files are needed and check availability

# ---------------------------------------------------------------------

echo

echo '---- INPUT FILES ----------------------------------------'

echo

# Change to input data (cdf) directory

cd ${cdfdir}

echo

# Take the time increment from flag list ('nil', if not defined)

set timeinc = 'nil'

# Find a first data file (if possible corresponding to start/end date

# If starttime is not a data time, take the first file in the direectory

if ( $direction == "f" ) then

  set file=${charp}${startdate_ymdh}

else

  set file=${charp}${enddate_ymdh}

endif

if ( ! -f $file ) then

  set file=`ls ${charp}[0-9_]*[0-9] | head -1 | sed -e 's/@//'`

endif

# Determine timeinc (the time difference in hours between two data file)

# if not already defined with option -i

if ( ${timeinc} == "nil" ) then

  set date1=`echo $file | cut -c 2-12`

  set n=`ls ${charp}[0-9_]*[0-9] | grep -n $date1 | awk -F: '{print $1}'`

  @ n ++

  set date2=`ls ${charp}[0-9_]*[0-9] | head -$n | tail -1 | cut -c 2-12`

  set timeinc=`${LAGRANTO}/goodies/gettidiff $date2 $date1`

endif

if ( $timeinc == 0 ) then

    echo " ERROR: cannot set the time increment between input files ***"

    exit 1

endif

# Search the first file to use

set flag=0

set td=

foreach i ( ${charp}????????_?? )

  set date = `echo $i | cut -c 2-12`

  set td1  = `${LAGRANTO}/goodies/gettidiff ${startdate_ymdh} ${date}`

  set td2  = `${LAGRANTO}/goodies/gettidiff ${enddate_ymdh}   ${date}`

  if (( $td1 < $timeinc || $td2 < $timeinc ) && ( $td1 >= 0 || $td2 >= 0 )) then

      set datfiles=$date

      if ( $td1 < $timeinc    ) set td=$td1

      if ( $td2 < $timeinc    ) set td=$td2

      if ( ( $startdate_min > 0 ) || ( $enddate_min > 0 ) ) @ td ++ 

      goto label2

  endif

end

# if no P/T-files are available for the specified time period, then $td is

# still undefined

if ( $td == "" ) then

  echo " ERROR: no data files available for the specified time period"

  exit 1

endif

# Everything is fine so far: proceed

label2:

# Calculate the number of further files

@ num = ( $timediff_hh + $td ) / $timeinc + 1

@ dum1 = ( $num - 1 ) * $timeinc

@ dum2 = $timediff_hh + $td

if ( $dum1 != $dum2 ) @ num ++

# Get a list of all needed files

set numfiles=$num

set sfiles=1

while ( $num > 1 )

  set date=`${LAGRANTO}/goodies/newtime $date $timeinc`

  if ( ! -f ${charp}${date} ) then

    echo " ERROR: file with primary data is missing for $date"

    exit 1

  else if ( ! -f ${chars}${date} ) then

    set sfiles=0

    set datfiles=`echo $datfiles $date`

  else

    set datfiles=`echo $datfiles $date`

  endif

  @ num --

end

# Write some status information

echo "Primary file prefix            : ${charp}"

echo "Secondary file prefix          : ${chars}"

echo "Time increment for input files : ${timeinc}"

echo "# input files                  : ${numfiles}"

echo "${charp} files availability           : 1"  

echo "${chars} files availability           : ${sfiles}"     

echo "First input file               : $datfiles[1] " 

echo "Last input file                : $datfiles[$numfiles] " 

# ---------------------------------------------------------------------

# Prepare run directory - copy all needed files

# ---------------------------------------------------------------------

echo

echo '---- PREPARE RUN DIRECTORY ------------------------------'

echo

# Change to run directory

cd ${rundir}

echo

# Link cdf input files

foreach date ( $datfiles )

  if ( -f ${cdfdir}/${charp}${date} ) then

     if ( ! -f  ${charp}${date} ) then

        ln -s  ${cdfdir}/${charp}${date}  ${charp}${date}

        echo "Linking  ${date} "

     else

        echo "Existing ${date} "

     endif

  endif

  if ( -f ${cdfdir}/${chars}${date} ) then

     if ( ! -f  ${chars}${date} ) then

        ln -sf  ${cdfdir}/${chars}${date}  ${chars}${date}

     endif

  endif

end

# Change times on netCDF files relative to reference date

if ( "${changet}" == "true" ) then

 echo

 foreach i ( $datfiles )

   ${LAGRANTO}/goodies/changet.sh ${refdate} ${charp}${i}

 end

 if ( ${sfiles} == 1 ) then

   echo

   foreach i ( $datfiles )

     ${LAGRANTO}/goodies/changet.sh ${refdate} ${chars}${i}

   end

 endif

endif

# Get the constants file for each file

set first = 1

foreach date ( $datfiles )

  set cstname = `ncdump -h ${charp}${date} | grep constants_file_name`

  set cstname = `echo \'${cstname}\' |   awk -F\" '{print $2}'`

  if ( -f ${cdfdir}/${cstname} ) then

    if ( ! -f ${cstname} ) then

       ln -s  ${cdfdir}/${cstname}  ${cstname}

       echo "Linking  constants file ${cstname}"

       set first = 0

    else if ( "${first}" == "1" ) then

       echo "Existing constants file ${cstname}"

       set first = 0

    endif

  endif

end

# Copy the tracevars file

if ( "${flag_tracevars}" == "file" ) then

   if ( -f ${tradir}/${tracefile} ) then

      \cp ${tradir}/${tracefile} .

   endif

endif

# Copy the start file/criterion

if ( "${flag_startf}" == "criterion" ) then

   \rm -f startf.criterion

   echo ${startf} > startf.criterion

   set startf =  "startf.criterion"

else if ( "${flag_startf}" == "file" ) then

   if ( -f ${tradir}/${startf} ) then

     \cp ${tradir}/${startf} .

   endif

else if ( "${flag_startf}" == "point" ) then

   \rm -f startf

   echo ${startf}  > startf

   set startf      =  "startf"

   set flag_startf = "file"

endif 

# Copy the select file/criterion

if ( "${flag_select}" == "criterion" ) then

   \rm -f select.criterion

   echo ${select} > select.criterion

   set select = "select.criterion"

else

   if ( -f ${tradir}/${select} ) then

     \cp ${tradir}/${select} .

   endif

endif 

# ---------------------------------------------------------------------

# Prepare the run script

# ---------------------------------------------------------------------

echo

echo '---- PREPARE RUN SCRIPT ---------------------------------'

echo

# Remove runscript if it already exists

if ( -f ${runscript}.sh ) then

   \rm -f ${runscript}.sh

endif 

# Write header

echo '#\!/bin/csh'                    >! ${runscript}.sh

echo "#"                              >> ${runscript}.sh

echo "#----- Calling command"         >> ${runscript}.sh

echo "#"                              >> ${runscript}.sh

echo "# lagranto ${lagranto_call} "   >> ${runscript}.sh

echo "#"                              >> ${runscript}.sh 

echo "#----- Output file    "         >> ${runscript}.sh

echo "#"                              >> ${runscript}.sh

echo "# ${outfile}                "   >> ${runscript}.sh

echo "#"                              >> ${runscript}.sh 

# Decide whether <create_startf> has to be run

if ( "${flag_startf}" == "criterion" ) then

  echo "#------ Run <startf>"                                                                                       >> ${runscript}.sh

  echo "#"                                                                                                                 >> ${runscript}.sh

  echo ${LAGRANTO}/bin/create.sh ${startdate} startf \"`cat startf.criterion`\" -t ${tracefile} -regionf ${regionf} >> ${runscript}.sh 

  echo "#"                                                                                                                 >> ${runscript}.sh

  set startf = "startf"

endif

# Check whether startfile is ready

cat >> ${runscript}.sh <<EOF 

#------ Abort if no startf is available

#

if ( ! -f ${startf} ) then

  echo " ERROR: no start file available .... Stop"

  exit 1

endif

EOF

# Decide wich intermediate format is used (needed for efficient communication between different programs)

set iform1 = ""

set iform2 = ""

if ( "${tracefile}" != ""    ) set iform1 = ".4"

if ( "${select}"    != "nil" ) set iform2 = ".4"

# Remove all trajectory files which might already be there

cat >> ${runscript}.sh <<EOF 

#

#------ Remove existing trajectory files

#

if ( -f ${outfile}${iform1} ) then

  \rm -f ${outfile}${iform1}

endif

if ( -f ${outfile}${iform2} ) then

  \rm -f ${outfile}${iform2}

endif

if ( -f ${outfile} ) then

  \rm -f ${outfile}

endif

EOF

# Write call to <caltra> into runscript

echo "#"                                                                                      >> ${runscript}.sh

echo "#------ Run <caltra>"                                                                   >> ${runscript}.sh

echo "#"                                                                                      >> ${runscript}.sh

echo ${LAGRANTO}/bin/caltra.sh ${startdate} ${enddate} startf ${outfile}${iform1} ${jumpflag} >> ${runscript}.sh  

# Check whether caltra was successful

cat >> ${runscript}.sh <<EOF 

#

#------ Abort if caltra was not successful

#

if ( ! -f ${outfile}${iform1} ) then

  echo " ERROR: caltra failed .... Stop"

  exit 1

endif

EOF

#  Decide whether <trace> has to be run

if ( "${tracefile}" != "" ) then

  echo "#"                                                                                    >> ${runscript}.sh

  echo "#------ Run <trace>"                                                                  >> ${runscript}.sh

  echo "#"                                                                                    >> ${runscript}.sh

  echo ${LAGRANTO}/bin/trace.sh ${outfile}${iform1} ${outfile}${iform2} -v ${tracefile}       >> ${runscript}.sh 

endif

# Check whether trace was successful

cat >> ${runscript}.sh <<EOF 

#

#------ Abort if trace was not successful

#

if ( ! -f ${outfile}${iform2} ) then

  echo " ERROR: trace failed .... Stop"

  exit 1

endif

EOF

#  Decide whether <select> has to be run

if ( "${select}" != "nil" ) then                        

  echo "#"                                                                                               >> ${runscript}.sh

  echo "#------ Run <select>"                                                                            >> ${runscript}.sh

  echo "#"                                                                                               >> ${runscript}.sh

  echo ${LAGRANTO}/bin/select.sh ${outfile}${iform2} ${outfile}  \"`cat ${select}`\" -regionf ${regionf} >> ${runscript}.sh 

  echo "#"                                                                                               >> ${runscript}.sh

endif

# Show runscript on screen

more ${runscript}.sh

# Change runscript to executable

chmod u+x ${runscript}.sh

# Decide whether to stop at this place (only preparation for Lagranto run)

if ( "${prepflag}" == "prep" ) then

  echo

  echo '---- READY TO RUN ----- ---------------------------------'

  echo

  echo " Would you like to change to the rundirectory [y/n] "

  set id = $<

  if ( ( "${id}" == "y" ) | ( "${id}" == "Y" ) ) then

     cd ${rundir}

     xterm &

  endif

  exit 0

endif  

# Define environment variable for the case

echo

echo '---- REMEMBER MOST RECENT CALL --------------------------'

echo

cd ${calldir}

if ( -f lagranto.param ) \rm lagranto.param

echo "${rundir}"  >! lagranto.param

echo "${outfile}" >> lagranto.param

cd ${rundir}

echo

echo " run directory + output file -> lagranto.param"

# ---------------------------------------------------------------------

# Run lagranto

# ---------------------------------------------------------------------

echo

echo '---- RUN LAGRANTO ---------------------------------------'

echo

if ( "${logfile}" != "/dev/stdout" ) then

    echo "log goes to ${logfile}"

endif

# Remove logfile

if ( "${logfile}" != "/dev/stdout" ) then

    \rm -f    ${logfile}

endif

# Run it

${rundir}/${runscript}.sh > ${logfile}

# Check for errors in logfile

if ( "${logfile}" != "/dev/stdout" ) then

   grep ERROR ${logfile} 

endif

# ---------------------------------------------------------------------

# Make clean and finish lagranto run

# ---------------------------------------------------------------------

# Remove unneeded files

\rm -f fort.9

# Remove files if requested

if ( "${keepflag}" != "keep" ) then

   echo 

   echo '---- MAKING CLEAN ---------------------------------------'

   echo

   cd ${rundir}

   set runscript = "${runscript}.sh"

   foreach file ( `\ls -L1` )

      set id = "0"

      if ( "${file}" == "${outfile}"   ) set id="1" 

      if ( "${file}" == "${runscript}" ) set id="1" 

      if ( "${file}" == "${logfile}"   ) set id="1" 

      if ( "${id}" == "0" ) \rm -f ${file}      

   end

endif

# Everything is fine!

echo

echo '             *** END OF LAGRANTO ***             '

echo '========================================================='

echo

exit 0