Subversion Repositories lagranto.ecmwf

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Rev 36 Rev 39
Line 19... Line 19...
19 
# Set paths for development and for synchronisation (operational)
 19 
# Set paths for development and for synchronisation (operational)
20 
set path_devel = "${DYN_TOOLS}//lagranto.ecmwf/"
 20 
set path_devel = "${DYN_TOOLS}//lagranto.ecmwf/"
21 
set path_sync  = "${DYN_TOOLS}/lagranto/"
 21 
set path_sync  = "${DYN_TOOLS}/lagranto/"
22 
 
 22 
 
23 
# Set Fortran compiler
 23 
# Set Fortran compiler
24 
setenv FORTRAN  pgf90
 24 
setenv FORTRAN pgf90
25 
 
 25 
 
26 
# Set netcdf format (ive, cdo, mch)
26 
# Set netcdf format (ive, cdo, mch)
27 
set ncdf = cdo
 27 
set ncdf = ive
28 
 
 28 
 
29 
# Init netCDF library depending on the Fortran compiler
 29 
# Init netCDF library depending on the Fortran compiler
30 
if ( "${FORTRAN}" == "pgf90" ) then
 30 
if ( "${FORTRAN}" == "pgf90" ) then
31 
  module load netcdf/4.2.1-pgf90
 31 
  module load netcdf/4.2.1-pgf90
32 
  module list
 32 
  module list
Line 34... Line 34...
34 
else if ( "${FORTRAN}" == "gfortran" ) then
 34 
else if ( "${FORTRAN}" == "gfortran" ) then
35 
  module load gfortran
 35 
  module load gfortran
36 
  module load netcdf/4.2.1
 36 
  module load netcdf/4.2.1
37 
 
 37 
 
38 
else if ( "${FORTRAN}" == "ifort" ) then
 38 
else if ( "${FORTRAN}" == "ifort" ) then
39 
  module load ifort/10.1.017
 39 
  module load intel
40 
  module load netcdf/4.1.1-ifort
 40 
  module load netcdf/4.3.2-intel
41 
 
 41 
 
42 
else
 42 
else
43 
  echo "Fortran Compiler ${FORTRAN} not supported... Exit"
 43 
  echo "Fortran Compiler ${FORTRAN} not supported... Exit"
44 
  exit 1
 44 
  exit 1
45 
 
 45 
 
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 73 
 
74 
# Set list of core programs
 74 
# Set list of core programs
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set core  = "create_startf caltra trace select density lidar"
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set core  = "create_startf caltra trace select density lidar"
76 
 
 76 
 
77 
# Set list of goodies
 77 
# Set list of goodies
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set tools = "traj2num lsl2rdf changet extract getmima gettidiff getvars list2lsl lsl2list mergetra newtime reformat timeres trainfo difference datelist tracal"
78 
set goodies = "lsl2rdf changet extract getmima gettidiff getvars list2lsl lsl2list mergetra newtime reformat timeres trainfo difference datelist"
- 
 
 79 
 
- 
 
 80 
# Set list of tools
- 
 
 81 
set tools = "traj2num tracal footprint"
79 
 
 82 
 
80 
# Set list of libraries
 83 
# Set list of libraries
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set libs  = "iotra ioinp inter times libcdfio libcdfplus"
 84 
set libs  = "iotra ioinp inter times libcdfio libcdfplus"
82 
 
 85 
 
83 
# Core programs
 86 
# Core programs
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      set mode  = "core"
 90 
      set mode  = "core"
88 
   endif
 91 
   endif
89 
end
 92 
end
90 
 
 93 
 
91 
# Goodies
 94 
# Goodies
- 
 
 95 
foreach tool ( $goodies )
- 
 
 96 
   if ( "${tool}" == "${mode}" ) then
- 
 
 97 
      set goodies = ${tool}
- 
 
 98 
      set mode    = "goodies"
- 
 
 99 
   endif
- 
 
 100 
end
- 
 
 101 
 
- 
 
 102 
# Tools
92 
foreach tool ( $tools )
 103 
foreach tool ( $tools )
93 
   if ( "${tool}" == "${mode}" ) then
 104 
   if ( "${tool}" == "${mode}" ) then
94 
      set tools = ${tool}
 105 
      set tools = ${tool}
95 
      set mode  = "goodies"
 106 
      set mode  = "tools"
96 
   endif
 107 
   endif
97 
end
 108 
end
98 
 
 109 
 
99 
# Libraries
 110 
# Libraries
100 
foreach lib ( $libs )
 111 
foreach lib ( $libs )
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107 
# Check that the mode is ok
118 
# Check that the mode is ok
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if ( "${mode}" == "all"     ) goto modeok
 119 
if ( "${mode}" == "all"     ) goto modeok
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if ( "${mode}" == "lib"     ) goto modeok
 120 
if ( "${mode}" == "lib"     ) goto modeok
110 
if ( "${mode}" == "core"    ) goto modeok
 121 
if ( "${mode}" == "core"    ) goto modeok
111 
if ( "${mode}" == "goodies" ) goto modeok
 122 
if ( "${mode}" == "goodies" ) goto modeok
- 
 
 123 
if ( "${mode}" == "tools"   ) goto modeok
112 
if ( "${mode}" == "links"   ) goto modeok
 124 
if ( "${mode}" == "links"   ) goto modeok
113 
if ( "${mode}" == "clean"   ) goto modeok
 125 
if ( "${mode}" == "clean"   ) goto modeok
114 
if ( "${mode}" == "docu"    ) goto modeok
 126 
if ( "${mode}" == "docu"    ) goto modeok
115 
if ( "${mode}" == "sync"    ) goto modeok
 127 
if ( "${mode}" == "sync"    ) goto modeok
116 
echo "Unsupported mode ${mode} ... Stop"
 128 
echo "Unsupported mode ${mode} ... Stop"
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echo "Installing Lagranto goodies"
 353 
echo "Installing Lagranto goodies"
342 
echo "-----------------------------------------------------------------"
 354 
echo "-----------------------------------------------------------------"
343 
 
 355 
 
344 
cd ${LAGRANTO}/goodies
 356 
cd ${LAGRANTO}/goodies
345 
 
 357 
 
346 
foreach tool ( $tools )
 358 
foreach tool ( $goodies )
347 
 
 359 
 
348 
echo
 360 
echo
349 
echo "----- ${tool}"
 361 
echo "----- ${tool}"
350 
echo
 362 
echo
351 
\rm -f ${tool}.o
 363 
\rm -f ${tool}.o
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377 
echo "-----------------------------------------------------------------"
 389 
echo "-----------------------------------------------------------------"
378 
echo
 390 
echo
379 
 
 391 
 
380 
cd ${LAGRANTO}/goodies
 392 
cd ${LAGRANTO}/goodies
381 
 
 393 
 
382 
foreach tool ( $tools )
 394 
foreach tool ( $goodies )
383 
 
 395 
 
384 
if ( ! -f ${tool} ) then
 396 
if ( ! -f ${tool} ) then
385 
  echo "${tool} is missing... Stop"
 397 
  echo "${tool} is missing... Stop"
386 
  exit 1
 398 
  exit 1
387 
else
 399 
else
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394 
 
 406 
 
395 
# Exit if only goodies should be installed
 407 
# Exit if only goodies should be installed
396 
if ( "${mode}" == "goodies" ) exit 0
 408 
if ( "${mode}" == "goodies" ) exit 0
397 
 
 409 
 
398 
# -----------------------------------------------------------------------------
 410 
# -----------------------------------------------------------------------------
- 
 
 411 
# Compile Lagrango tools
- 
 
 412 
# -----------------------------------------------------------------------------
- 
 
 413 
 
- 
 
 414 
if ( ("${mode}" == "all" ) | ("${mode}" == "tools" ) ) then
- 
 
 415 
 
- 
 
 416 
echo
- 
 
 417 
echo "-----------------------------------------------------------------"
- 
 
 418 
echo "Installing Lagranto tools"
- 
 
 419 
echo "-----------------------------------------------------------------"
- 
 
 420 
 
- 
 
 421 
cd ${LAGRANTO}/tools
- 
 
 422 
 
- 
 
 423 
foreach tool ( $tools )
- 
 
 424 
 
- 
 
 425 
echo
- 
 
 426 
echo "----- ${tool}"
- 
 
 427 
echo
- 
 
 428 
\rm -f ${tool}.o
- 
 
 429 
\rm -f ${tool}
- 
 
 430 
if ( -f ${tool}.make ) then
- 
 
 431 
   make -f ${tool}.make
- 
 
 432 
else if ( -f ${tool}.install ) then
- 
 
 433 
   ./${tool}.install
- 
 
 434 
endif
- 
 
 435 
 
- 
 
 436 
if ( ! -f ${tool} ) then
- 
 
 437 
  echo "Problem in compiling ${tool} ... Stop"
- 
 
 438 
  exit 1
- 
 
 439 
endif
- 
 
 440 
 
- 
 
 441 
end
- 
 
 442 
 
- 
 
 443 
endif
- 
 
 444 
 
- 
 
 445 
if ( "${mode}" == "tools" ) exit 0
- 
 
 446 
 
- 
 
 447 
# -----------------------------------------------------------------------------
- 
 
 448 
# Check that all Lagranto tools are available
- 
 
 449 
# -----------------------------------------------------------------------------
- 
 
 450 
 
- 
 
 451 
echo
- 
 
 452 
echo "-----------------------------------------------------------------"
- 
 
 453 
echo "Check that all Lagranto tools are available"
- 
 
 454 
echo "-----------------------------------------------------------------"
- 
 
 455 
echo
- 
 
 456 
 
- 
 
 457 
cd ${LAGRANTO}/tools
- 
 
 458 
 
- 
 
 459 
foreach tool ( $tools )
- 
 
 460 
 
- 
 
 461 
if ( ! -f ${tool} ) then
- 
 
 462 
  echo "${tool} is missing... Stop"
- 
 
 463 
  exit 1
- 
 
 464 
else
- 
 
 465 
  ls -l ${tool}
- 
 
 466 
endif
- 
 
 467 
 
- 
 
 468 
end
- 
 
 469 
 
- 
 
 470 
endif
- 
 
 471 
 
- 
 
 472 
# Exit if only goodies should be installed
- 
 
 473 
if ( "${mode}" == "tools" ) exit 0
- 
 
 474 
 
- 
 
 475 
# -----------------------------------------------------------------------------
399 
# Create links to programs
 476 
# Create links to programs
400 
# -----------------------------------------------------------------------------
 477 
# -----------------------------------------------------------------------------
401 
 
 478 
 
402 
if ( ("${mode}" == "all" ) | ("${mode}" == "links" )  ) then
 479 
if ( ("${mode}" == "all" ) | ("${mode}" == "links" )  ) then
403 
 
 480 
 
Line 440... Line 517...
440 
ln -svf ${LAGRANTO}/trace/trace.sh          trace
 517 
ln -svf ${LAGRANTO}/trace/trace.sh          trace
441 
ln -svf ${LAGRANTO}/density/density.sh      density
 518 
ln -svf ${LAGRANTO}/density/density.sh      density
442 
ln -svf ${LAGRANTO}/startf/create_startf.sh startf
 519 
ln -svf ${LAGRANTO}/startf/create_startf.sh startf
443 
ln -svf ${LAGRANTO}/lidar/lidar.sh          lidar
 520 
ln -svf ${LAGRANTO}/lidar/lidar.sh          lidar
444 
 
 521 
 
445 
foreach tool ( $tools )
 522 
foreach tool ( $goodies )
446 
 
 - 
 
447 
ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}.sh
523 
  ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}.sh
448 
ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}.ecmwf
 524 
  ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}.ecmwf
449 
ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}
525 
  ln -svf ${LAGRANTO}/goodies/${tool}.sh     ${tool}
- 
 
 526 
end
450 
 
 527 
 
- 
 
 528 
foreach tool ( $tools )
- 
 
 529 
  ln -svf ${LAGRANTO}/tools/${tool}.sh     ${tool}.sh
- 
 
 530 
  ln -svf ${LAGRANTO}/tools/${tool}.sh     ${tool}.ecmwf
- 
 
 531 
  ln -svf ${LAGRANTO}/tools/${tool}.sh     ${tool}
451 
end
 532 
end
452 
 
 533 
 
453 
# Set link for create_startf / startf
 534 
# Set link for create_startf / startf
454 
\rm -f ${LAGRANTO}/startf
 535 
\rm -f ${LAGRANTO}/startf
455 
ln -svf ${LAGRANTO}/create_startf ${LAGRANTO}/startf
 536 
ln -svf ${LAGRANTO}/create_startf ${LAGRANTO}/startf
Line 486... Line 567...
486 
ln -svf ${path_devel}/density/density.sh         density.ecmwf
 567 
ln -svf ${path_devel}/density/density.sh         density.ecmwf
487 
ln -svf ${path_devel}/startf/create_startf.sh    startf.ecmwf
 568 
ln -svf ${path_devel}/startf/create_startf.sh    startf.ecmwf
488 
ln -svf ${path_devel}/lidar/lidar.sh             lidar.ecmwf
 569 
ln -svf ${path_devel}/lidar/lidar.sh             lidar.ecmwf
489 
ln -svf ${path_devel}/lidar/seltra.sh            seltra.ecmwf
 570 
ln -svf ${path_devel}/lidar/seltra.sh            seltra.ecmwf
490 
 
 571 
 
- 
 
 572 
foreach tool ( $goodies )
- 
 
 573 
  ln -svf ${path_devel}/goodies/${tool}.sh         ${tool}.ecmwf
- 
 
 574 
end
491 
foreach tool ( $tools )
 575 
foreach tool ( $tools )
492 
 
 - 
 
493 
ln -svf ${path_devel}/goodies/${tool}.sh         ${tool}.ecmwf
 576 
  ln -svf ${path_devel}/tools/${tool}.sh           ${tool}.ecmwf
494 
 
 - 
 
495 
end
 577 
end
496
578
497 
# Set all permissions
 579 
# Set all permissions
498 
chmod -R og+rx ${path_sync}/bin/
 580 
chmod -R og+rx ${path_sync}/bin/
499 
 
 581