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michaesp |
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#!/bin/csh
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# -----------------------------------------------------------------------------
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# Set some general parameters
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# -----------------------------------------------------------------------------
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# Usage
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if ( $#argv == 0 ) then
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echo "install.sh [lib|core|goodies|links|all|docu|clean] "
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exit 0
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endif
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# Set the mode
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set mode = $1
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# Set paths for development and for synchronisation (operational)
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set path_devel = "${DYN_TOOLS}//lagranto.ecmwf/"
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set path_sync = "${DYN_TOOLS}/lagranto.ecmwf/"
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# Init Fortran compiler and set netCDF acccordingly
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setenv FORTRAN pgf90
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# Init netCDF library depending on the Fortran compiler
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if ( "${FORTRAN}" == "pgf90" ) then
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michaesp |
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module load netcdf/4.2.1-pgf90
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module list
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michaesp |
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else if ( "${FORTRAN}" == "gfortran" ) then
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module load gfortran
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module load netcdf/4.1.1
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else if ( "${FORTRAN}" == "ifort" ) then
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module load ifort/10.1.017
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module load netcdf/4.1.1-ifort
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else
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echo "Fortran Compiler ${FORTRAN} not supported... Exit"
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exit 1
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endif
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# -----------------------------------------------------------------------------
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# Set internal parameters and detailed installation mode
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# -----------------------------------------------------------------------------
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# Set LAGRANTO environment variable
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setenv LAGRANTO ${path_devel}
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# Set netCDF paths
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michaesp |
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setenv NETCDF_LIB `nc-config --flibs`
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setenv NETCDF_INC `nc-config --fflags`
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michaesp |
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# Set list of core programs
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set core = "create_startf caltra trace select density lidar"
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# Set list of goodies
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set tools = "changecst changet extract getmima gettidiff getvars list2lsl lsl2list mergetra newtime reformat timeres trainfo difference datelist tracal"
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# Set list of libraries
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set libs = "iotra ioinp inter times libcdfio libcdfplus"
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# Core programs
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foreach prog ( $core )
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if ( "${prog}" == "${mode}" ) then
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set core = ${prog}
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set mode = "core"
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endif
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end
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# Goodies
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foreach tool ( $tools )
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if ( "${tool}" == "${mode}" ) then
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set tools = ${tool}
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set mode = "goodies"
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endif
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end
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# Libraries
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foreach lib ( $libs )
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if ( "${lib}" == "${mode}" ) then
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set libs = ${lib}
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set mode = "lib"
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endif
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end
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# Check that the mode is ok
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if ( "${mode}" == "all" ) goto modeok
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if ( "${mode}" == "lib" ) goto modeok
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if ( "${mode}" == "core" ) goto modeok
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if ( "${mode}" == "goodies" ) goto modeok
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if ( "${mode}" == "links" ) goto modeok
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if ( "${mode}" == "clean" ) goto modeok
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if ( "${mode}" == "docu" ) goto modeok
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echo "Unsupported mode ${mode} ... Stop"
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exit 1
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modeok:
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# -----------------------------------------------------------------------------
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# Make clean
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# -----------------------------------------------------------------------------
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if ( "${mode}" == "clean" ) then
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cd ${LAGRANTO}/
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foreach prog ( $core )
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\rm -f ${prog}/${prog} ${prog}/${prog}.o
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end
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\rm -f trace/calvar.o select/special.o
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foreach tool ( $tools )
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\rm -f goodies/${tool} goodies/${tool}.o
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end
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\rm -f goodies/*.mod goodies/*.o
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\rm lib/*.a lib/*.o
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foreach prog ( $core )
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\rm -f bin/${prog} bin/${prog}.sh bin/${prog}.ecmwf
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end
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\rm -f bin/seltra bin/seltra.sh bin/seltra.ecmwf
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foreach tool ( $tools )
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\rm -f bin/${tool} bin/${tool}.sh bin/${tool}.ecmwf
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end
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\rm -f bin/lagrantohelp.sh bin/lagrantohelp.ecmwf
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\rm -f bin/startf bin/startf.sh bin/startf.ecmwf
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\rm -f bin/lagranto.sh bin/lagranto.ecmwf
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\rm ${LAGRANTO}/startf
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exit 0
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endif
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# -----------------------------------------------------------------------------
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# Install reference
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# -----------------------------------------------------------------------------
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if ( ("${mode}" == "docu") | ("${mode}" == "all" ) ) then
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echo "-----------------------------------------------------------------"
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echo "Installing documentation"
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echo "-----------------------------------------------------------------"
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echo
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cd ${LAGRANTO}/docu/reference/
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\rm -f reference.ps
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\rm -f reference2.ps
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groff -man ../man/*.0 > reference2.ps
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ps2pdf reference2.ps
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latex title
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dvips title
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ps2pdf title.ps
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gs -dBATCH -dNOPAUSE -q -sDEVICE=pdfwrite -sOutputFile=reference.pdf title.pdf reference2.pdf
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\rm -f *.aux *.log *.dvi
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\rm -f title.ps reference2.ps
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\rm -f title.pdf reference2.pdf
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endif
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if ( "${mode}" == "docu" ) exit 0
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# -----------------------------------------------------------------------------
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# Install libraries
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# -----------------------------------------------------------------------------
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if ( ("${mode}" == "lib") | ("${mode}" == "all" ) ) then
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echo "-----------------------------------------------------------------"
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echo "Installing libraries"
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echo "-----------------------------------------------------------------"
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echo
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# Change to library directory
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cd ${LAGRANTO}/lib
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# Loop over all libraries - compile and make library
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foreach lib ( $libs )
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\rm -f ${lib}.a
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\rm -f ${lib}.o
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echo ${FORTRAN} -c -O ${lib}.f
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michaesp |
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${FORTRAN} -c -O ${NETCDF_INC} ${lib}.f
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michaesp |
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ar r ${lib}.a ${lib}.o
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\rm -f ${lib}.l ${lib}.o
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ranlib ${lib}.a
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if ( ! -f ${lib}.a ) then
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echo "Problem in compiling ${lib} ... Stop"
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exit 1
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endif
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end
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endif
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if ( "${mode}" == "lib" ) exit 0
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# -----------------------------------------------------------------------------
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# Check that libraries are ok
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# -----------------------------------------------------------------------------
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echo
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echo "-----------------------------------------------------------------"
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echo "Check that all libraries are available"
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echo "-----------------------------------------------------------------"
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echo
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# Change to library directory
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cd ${LAGRANTO}/lib
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# Check whether all libraries are available
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foreach lib ( $libs )
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if ( ! -f ${lib}.a ) then
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echo "Library ${lib} missing... Stop"
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exit 1
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else
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ls -l ${lib}.a
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endif
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end
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# Exit if only libraries shoudl be installed
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if ( "${mode}" == "lib" ) exit 0
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# -----------------------------------------------------------------------------
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# Compile Lagrango core programs
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# -----------------------------------------------------------------------------
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if ( ("${mode}" == "all" ) | ("${mode}" == "core" ) ) then
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echo
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echo "-----------------------------------------------------------------"
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echo "Installing Lagranto core programs"
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echo "-----------------------------------------------------------------"
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foreach prog ( $core )
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echo
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echo "----- $prog"
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echo
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cd ${LAGRANTO}/${prog}
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\rm -f ${prog}.o
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\rm -f ${prog}
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if ( "${prog}" == "trace" ) \rm calvar.o
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if ( "${prog}" == "select" ) \rm special.o
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\rm -f ${prog}
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make -f ${prog}.make
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if ( ! -f ${prog} ) then
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echo "Problem in compiling ${prog} ... Stop"
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exit 1
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endif
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end
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endif
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if ( "${mode}" == "core" ) exit 0
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# -----------------------------------------------------------------------------
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# Check that all Lagranto core programs are available
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# -----------------------------------------------------------------------------
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echo
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echo "-----------------------------------------------------------------"
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echo "Check that all Lagranto core programs are available"
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echo "-----------------------------------------------------------------"
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echo
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foreach prog ( $core )
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cd ${LAGRANTO}/${prog}
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if ( ! -f ${prog} ) then
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echo "${prog} is missing... Stop"
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exit 1
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else
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ls -l ${prog}
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endif
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end
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# Exit if only core programs shoudl be installed
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if ( "${mode}" == "core" ) exit 0
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# -----------------------------------------------------------------------------
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# Compile Lagrango goodies
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# -----------------------------------------------------------------------------
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if ( ("${mode}" == "all" ) | ("${mode}" == "goodies" ) ) then
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echo
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echo "-----------------------------------------------------------------"
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echo "Installing Lagranto goodies"
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echo "-----------------------------------------------------------------"
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cd ${LAGRANTO}/goodies
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foreach tool ( $tools )
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echo
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echo "----- ${tool}"
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echo
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\rm -f ${tool}.o
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\rm -f ${tool}
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if ( -f ${tool}.make ) then
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make -f ${tool}.make
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else if ( -f ${tool}.install ) then
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./${tool}.install
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endif
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if ( ! -f ${tool} ) then
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echo "Problem in compiling ${tool} ... Stop"
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exit 1
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endif
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end
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endif
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if ( "${mode}" == "goodies" ) exit 0
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328 |
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329 |
# -----------------------------------------------------------------------------
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# Check that all Lagranto goodies are available
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# -----------------------------------------------------------------------------
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332 |
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echo
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echo "-----------------------------------------------------------------"
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335 |
echo "Check that all Lagranto goodies are available"
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336 |
echo "-----------------------------------------------------------------"
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337 |
echo
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338 |
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cd ${LAGRANTO}/goodies
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340 |
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foreach tool ( $tools )
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342 |
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343 |
if ( ! -f ${tool} ) then
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echo "${tool} is missing... Stop"
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exit 1
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else
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347 |
ls -l ${tool}
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endif
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349 |
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end
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endif
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353 |
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354 |
# Exit if only goodies should be installed
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355 |
if ( "${mode}" == "goodies" ) exit 0
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356 |
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357 |
# -----------------------------------------------------------------------------
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358 |
# Create links to programs
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359 |
# -----------------------------------------------------------------------------
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360 |
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361 |
if ( ("${mode}" == "all" ) | ("${mode}" == "links" ) ) then
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362 |
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363 |
echo
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364 |
echo "-----------------------------------------------------------------"
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365 |
echo "Create links in ${LAGRANTO}/bin/"
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366 |
echo "-----------------------------------------------------------------"
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367 |
echo
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368 |
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369 |
if ( ! -d ${LAGRANTO}/bin ) mkdir ${LAGRANTO}/bin
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370 |
cd ${LAGRANTO}/bin
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371 |
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372 |
ln -svf ${LAGRANTO}/bin/lagranto lagranto.sh
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373 |
ln -svf ${LAGRANTO}/bin/lagranto lagranto.ecmwf
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374 |
ln -svf ${LAGRANTO}/bin/lagrantohelp lagrantohelp.sh
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375 |
ln -svf ${LAGRANTO}/bin/lagrantohelp lagrantohelp.ecmwf
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376 |
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377 |
ln -svf ${LAGRANTO}/caltra/caltra.sh caltra.sh
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378 |
ln -svf ${LAGRANTO}/startf/create_startf.sh create_startf.sh
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379 |
ln -svf ${LAGRANTO}/select/select.sh select.sh
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| 5 |
michaesp |
380 |
ln -svf ${LAGRANTO}/select/select.sh seltra.sh
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| 3 |
michaesp |
381 |
ln -svf ${LAGRANTO}/trace/trace.sh trace.sh
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382 |
ln -svf ${LAGRANTO}/density/density.sh density.sh
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383 |
ln -svf ${LAGRANTO}/startf/create_startf.sh startf.sh
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384 |
ln -svf ${LAGRANTO}/lidar/lidar.sh lidar.sh
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385 |
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386 |
ln -svf ${LAGRANTO}/caltra/caltra.sh caltra.ecmwf
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387 |
ln -svf ${LAGRANTO}/startf/create_startf.sh create_startf.ecmwf
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388 |
ln -svf ${LAGRANTO}/select/select.sh select.ecmwf
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| 5 |
michaesp |
389 |
ln -svf ${LAGRANTO}/select/select.sh seltra.ecmwf
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| 3 |
michaesp |
390 |
ln -svf ${LAGRANTO}/trace/trace.sh trace.ecmwf
|
|
|
391 |
ln -svf ${LAGRANTO}/density/density.sh density.ecmwf
|
|
|
392 |
ln -svf ${LAGRANTO}/startf/create_startf.sh startf.ecmwf
|
|
|
393 |
ln -svf ${LAGRANTO}/lidar/lidar.sh lidar.ecmwf
|
|
|
394 |
|
|
|
395 |
ln -svf ${LAGRANTO}/caltra/caltra.sh caltra
|
|
|
396 |
ln -svf ${LAGRANTO}/startf/create_startf.sh create_startf
|
|
|
397 |
ln -svf ${LAGRANTO}/select/select.sh select
|
| 5 |
michaesp |
398 |
ln -svf ${LAGRANTO}/select/select.sh seltra
|
| 3 |
michaesp |
399 |
ln -svf ${LAGRANTO}/trace/trace.sh trace
|
|
|
400 |
ln -svf ${LAGRANTO}/density/density.sh density
|
|
|
401 |
ln -svf ${LAGRANTO}/startf/create_startf.sh startf
|
|
|
402 |
ln -svf ${LAGRANTO}/lidar/lidar.sh lidar
|
|
|
403 |
|
|
|
404 |
foreach tool ( $tools )
|
|
|
405 |
|
|
|
406 |
ln -svf ${LAGRANTO}/goodies/${tool}.sh ${tool}.sh
|
|
|
407 |
ln -svf ${LAGRANTO}/goodies/${tool}.sh ${tool}.ecmwf
|
|
|
408 |
ln -svf ${LAGRANTO}/goodies/${tool}.sh ${tool}
|
|
|
409 |
|
|
|
410 |
end
|
|
|
411 |
|
|
|
412 |
# Set link for create_startf / startf
|
|
|
413 |
\rm -f ${LAGRANTO}/startf
|
|
|
414 |
ln -svf ${LAGRANTO}/create_startf ${LAGRANTO}/startf
|
|
|
415 |
|
|
|
416 |
# Set extra name for <select> to avoid conflict in BASH
|
|
|
417 |
ln -svf ${LAGRANTO}/select/select.sh seltra
|
|
|
418 |
ln -svf ${LAGRANTO}/select/select.sh seltra.sh
|
|
|
419 |
ln -svf ${LAGRANTO}/select/select.sh seltra.ecmwf
|
|
|
420 |
|
|
|
421 |
endif
|
|
|
422 |
|
|
|
423 |
|
|
|
424 |
# -----------------------------------------------------------------------------
|
|
|
425 |
# Synchronise ( development -> operational )
|
|
|
426 |
# -----------------------------------------------------------------------------
|
|
|
427 |
|
|
|
428 |
if ( "${mode}" == "sync" ) then
|
|
|
429 |
|
|
|
430 |
echo
|
|
|
431 |
echo "-----------------------------------------------------------------"
|
|
|
432 |
echo "Sync ( development -> operational )"
|
|
|
433 |
echo "-----------------------------------------------------------------"
|
|
|
434 |
echo
|
|
|
435 |
|
|
|
436 |
# Synchronize directories
|
|
|
437 |
rsync --delete -avz ${path_devel} ${path_sync}
|
|
|
438 |
|
|
|
439 |
# Set the correct path
|
|
|
440 |
setenv LAGRANTO ${path_sync}
|
|
|
441 |
|
|
|
442 |
# Set the correct links
|
|
|
443 |
if ( ! -d ${LAGRANTO}/bin ) mkdir ${LAGRANTO}/bin
|
|
|
444 |
cd ${LAGRANTO}/bin
|
|
|
445 |
|
|
|
446 |
ln -svf ${LAGRANTO}/bin/lagranto lagranto.sh
|
|
|
447 |
ln -svf ${LAGRANTO}/bin/lagranto lagranto.ecmwf
|
|
|
448 |
ln -svf ${LAGRANTO}/bin/lagrantohelp lagrantohelp.sh
|
|
|
449 |
ln -svf ${LAGRANTO}/bin/lagrantohelp lagrantohelp.ecmwf
|
|
|
450 |
|
|
|
451 |
ln -svf ${LAGRANTO}/caltra/caltra.sh caltra.sh
|
|
|
452 |
ln -svf ${LAGRANTO}/startf/create_startf.sh create_startf.sh
|
|
|
453 |
ln -svf ${LAGRANTO}/select/select.sh select.sh
|
|
|
454 |
ln -svf ${LAGRANTO}/trace/trace.sh trace.sh
|
|
|
455 |
ln -svf ${LAGRANTO}/density/density.sh density.sh
|
|
|
456 |
ln -svf ${LAGRANTO}/startf/create_startf.sh startf.sh
|
|
|
457 |
ln -svf ${LAGRANTO}/lidar/lidar.sh lidar.sh
|
|
|
458 |
|
|
|
459 |
ln -svf ${LAGRANTO}/caltra/caltra.sh caltra.ecmwf
|
|
|
460 |
ln -svf ${LAGRANTO}/startf/create_startf.sh create_startf.ecmwf
|
|
|
461 |
ln -svf ${LAGRANTO}/select/select.sh select.ecmwf
|
|
|
462 |
ln -svf ${LAGRANTO}/trace/trace.sh trace.ecmwf
|
|
|
463 |
ln -svf ${LAGRANTO}/density/density.sh density.ecmwf
|
|
|
464 |
ln -svf ${LAGRANTO}/startf/create_startf.sh startf.ecmwf
|
|
|
465 |
ln -svf ${LAGRANTO}/lidar/lidar.sh lidar.ecmwf
|
|
|
466 |
|
|
|
467 |
ln -svf ${LAGRANTO}/caltra/caltra.sh caltra
|
|
|
468 |
ln -svf ${LAGRANTO}/startf/create_startf.sh create_startf
|
|
|
469 |
ln -svf ${LAGRANTO}/select/select.sh select
|
|
|
470 |
ln -svf ${LAGRANTO}/trace/trace.sh trace
|
|
|
471 |
ln -svf ${LAGRANTO}/density/density.sh density
|
|
|
472 |
ln -svf ${LAGRANTO}/startf/create_startf.sh startf
|
|
|
473 |
ln -svf ${LAGRANTO}/lidar/lidar.sh lidar
|
|
|
474 |
|
|
|
475 |
foreach tool ( $tools )
|
|
|
476 |
|
|
|
477 |
ln -svf ${LAGRANTO}/goodies/${tool}.sh ${tool}.sh
|
|
|
478 |
ln -svf ${LAGRANTO}/goodies/${tool}.sh ${tool}.ecmwf
|
|
|
479 |
ln -svf ${LAGRANTO}/goodies/${tool}.sh ${tool}
|
|
|
480 |
|
|
|
481 |
end
|
|
|
482 |
|
|
|
483 |
# Set all permissions
|
|
|
484 |
chmod -R og+rx ${path_sync}
|
|
|
485 |
|
|
|
486 |
# Set link for create_startf / startf
|
|
|
487 |
ln -s ${LAGRANTO}/create_startf ${LAGRANTO}/startf
|
|
|
488 |
|
|
|
489 |
endif
|
|
|
490 |
|
|
|
491 |
# -----------------------------------------------------------------------------
|
|
|
492 |
# Final tasks
|
|
|
493 |
# -----------------------------------------------------------------------------
|
|
|
494 |
|
|
|
495 |
echo
|
|
|
496 |
echo "-----------------------------------------------------------------"
|
|
|
497 |
echo "Installation complete"
|
|
|
498 |
echo "-----------------------------------------------------------------"
|
|
|
499 |
echo
|
|
|
500 |
echo "Please set the environmental variable LAGRANTO"
|
|
|
501 |
echo
|
|
|
502 |
echo " setenv LAGRANTO ${LAGRANTO}"
|
|
|
503 |
echo
|
|
|
504 |
|
|
|
505 |
|
|
|
506 |
|
|
|
507 |
|
|
|
508 |
|